sainsc

Subpackages

• sainsc.io
• sainsc.lazykde
• sainsc.utils

Classes

GridCounts	Object holding each gene as count data in a sparse 2D-grid.
LazyKDE	Class to analyze kernel density estimates (KDE) for large number of genes.

Functions

gaussian_kernel(bw, radius, *[, dtype, circular])	Generate a 2D Gaussian kernel array.
read_StereoSeq(filepath, *[, resolution, sep, n_threads])	Read a Stereo-seq GEM file.
read_StereoSeq_bins(filepath[, bin_size, spatialdata, ...])	Read a Stereo-seq GEM file into bins.