sainsc.lazykde.LazyKDE.kde
==========================

.. py:method:: sainsc.lazykde.LazyKDE.kde(gene, *, threshold = None)

   Calculate kernel density estimate (KDE).

   The kernel will be used from :py:attr:`sainsc.LazyKDE.kernel`.

   :param gene: List of genes for which to calculate the KDE.
   :type gene: collections.abc.Sequence[str]
   :param threshold: Relative threshold of maximum of the kernel that is used to filter beads.
                     All values below :math:`threshold * max(kernel)` are set to 0. Filtering is done
                     after calculating the KDE which sets it apart from reducing `truncate`.
   :type threshold: float, optional

   .. seealso:: :py:meth:`sainsc.LazyKDE.gaussian_kernel`