Tutorials

To follow the Tutorials, make sure you have sainsc installed already. Importantly, some tutorials may require additional dependencies. Pay close attention at the start of each tutorial whether additional packages must be installed. Alternatively, you can install all packages required for the tutorials with

pip install sainsc[tutorial]

The tutorials are available as Jupyter Notebooks which can be downloaded from GitHub if you want to follow along interactively (see here).

• Loading data
• Selecting a region of interest
• Celltyping
• Plotting tips and tricks
• Save and Export
• Tips & Tricks
• VisiumHD: From 16 µm to 2 µm resolution